As of May 2024, to guarantee the long-term sustainability of the portal and to continue to provide you with reference-quality genomes, we have transitioned the ATCC Genome Portal over to a supporting membership service. Learn more about ATCC supporting memberships here.
- Vaccinia virus
- Rabbitpox virus
Rabbitpox virus (ATCC® VR-1591™)
Overview
Related Genomes
Quality Control
| Assembly Summary | |
|---|---|
| Date Published | December 13, 2024 |
| Length | 187,793 nt |
| Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
| Number of Segments | 4 |
| Assembly Level | Complete |
| N50 | 182,889 nt |
| %GC | 33.37% |
| Organism Summary | |
|---|---|
| Name | ATCC® VR-1591™ |
| Isolation | Outbreak of rabbitpox; ATCC VR-1591 was derived by passage of original preparation ATCC V-157 in cell culture at ATCC. Holland. |
| Biosafety Level | 2 |
| Annotations Summary |
|---|
| Input Reads Summary | |
|---|---|
| Oxford Nanopore Read Count | 22,892 |
| Oxford Nanopore Median Q Score | 35 |
| Illumina Read Count | 2,743,450 |
| Illumina Mean Coverage Depth | 317.49× |
| Illumina Median Q Score | 39 |
Most similar genomes
No genomes with >95% similarity found.
Other members of this genus
No genomes found sharing the same genus.
Sequencing Quality Control
Quality control statistics on Illumina sequencing data.
3 out of 3 passed
PassedMedian Q score, all bases39
PassedPercent of median Q scores per cycle greater than 25100%
PassedAmbiguous content (% N bases)0%
Notes
This virus was assembled and curated using Oatmeal v2.1. See our technical documentation for further details: https://docs.onecodex.com/en/articles/5357065-assembly-qc-and-annotation-pipeline-versions
This website uses cookies to ensure you get the best experience on our website. Learn moreDecline