ATCC® TSD-109™ | Bacillus paralicheniformis

Overview

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Organism Summary
Catalog Number	ATCC® TSD-109™
Strain Alias	AAU M 8
Isolation	Rhizospheric soil of organicallv grown rice cv lR-64, Main Rice Research Station functioning under Anand Agricultural University at Nawaga
Tags	Type Strain
Biosafety Level	1
Type Strain	Yes

Assembly Summary
Date Published	December 12, 2025
Length	4,217,271 nt
Sequencing Technology	Illumina + Oxford Nanopore Hybrid Assembly
Number of Contigs	1 (All Circularized)
N50	4,217,271 nt
%GC	46.02%

Annotations Summary
Number of CDS	4193
Number of Hypothetical Proteins	359
Number of tRNA	83
Number of 5s rRNA	8
Number of 16s rRNA	8
Number of 23s rRNA	8

Input Reads Summary
Oxford Nanopore Read Count	144,607
Oxford Nanopore Median Q Score	34
Illumina Read Count	7,114,080
Illumina Mean Coverage Depth	437.367×
Illumina Median Q Score	40

The following genomes have the greatest genomic similarity to this one (≥95% average nucleotide identity):

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		Taxonomic Name	ATCC Product Page	Strain Alias	Tags	Date Published	Length

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Sequencing Quality Control

Sequencing Quality Control Metrics
Number of trimmed reads	7,114,080
Median Q score, all bases	40
Ambiguous content (% N bases)	0%

Assembly Quality Control Metrics
Estimated genome completeness	99.59%
Estimated genome contamination	0%
Illumina depth of coverage	437.367×
ONT depth of coverage	116.337×

This bacterium was assembled, annotated, and curated using Oatmeal v2.1. See our technical documentation for further details: https://docs.onecodex.com/en/articles/5357065-assembly-qc-and-annotation-pipeline-versions