Assembly Summary | |
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Date Published | February 26, 2020 |
Length | 5,334,379 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 7 (1 Circularized) |
Assembly Level | Chromosome |
N50 | 5,209,108 nt |
%GC | 67.04% |
Organism Summary | |
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Name | ATCC® 25592™ |
Isolation | Sputum of woman with cavitary disease of both upper lungs |
Tags | Type Strain |
Biosafety Level | 2 |
Type Strain | Yes |
Annotations Summary | |
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Number of CDS | 5,062 |
Number of Hypothetical Proteins | 2,587 |
Number of tRNA | 52 |
Number of 5s rRNA | 2 |
Number of 16s rRNA | 2 |
Number of 23s rRNA | 2 |
Input Reads Summary | |
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Oxford Nanopore Read Count | 250,543 |
Oxford Nanopore Median Q Score | 21 |
Illumina Read Count | 3,642,159 |
Illumina Mean Coverage Depth | 123.058× |
Illumina Median Q Score | 38 |
Contig | Start | End | Name | Protein Product | EC Number | Type | Uniprot ID | Jump |
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No genomes with >95% similarity found.
No genomes found sharing the same genus.