Organism Summary | |
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Catalog Number | ATCC® VR-5™ |
Strain Alias | Adenoid 75 |
Isolation | Spontaneously degenerating tissue culture of adenoid tissue from a 4-year-old girl with enlarged chronically infected tonsils. |
Biosafety Level | 2 |
Assembly Summary | |
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Date Published | July 1, 2021 |
Length | 35,725 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 1 (0 Circularized) |
Assembly Level | Complete |
N50 | 35,725 nt |
%GC | 55.22% |
Annotations Summary |
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Input Reads Summary | |
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Oxford Nanopore Read Count | 62,030 |
Oxford Nanopore Median Q Score | 24 |
Illumina Read Count | 37,159,056 |
Illumina Mean Coverage Depth | 54,068.377× |
Illumina Median Q Score | 34 |
The following genomes have the greatest genomic similarity to this one (≥95% average nucleotide identity):
Taxonomic Name | ATCC Product Page | Strain Alias | Tags | Date Published | Length | Download |
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Sequencing Quality Control | |
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Median Q score, all bases | 34 |
Percent of median Q scores per cycle greater than 25 | 1% |
Ambiguous content (% N bases) | 0% |
This virus was assembled and curated using Oatmeal v2.1. See our technical documentation for further details: https://docs.onecodex.com/en/articles/5357065-assembly-qc-and-annotation-pipeline-versions