Purchased a strain from ATCC? Enter in the lot number to download the genome or learn more about our supporting memberships here.
Overview
Related Genomes
Quality Control
| Assembly Summary | |
|---|---|
| Date Published | July 1, 2021 |
| Length | 35,725 nt |
| Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
| Number of Contigs | 1 (0 Circularized) |
| Assembly Level | Complete |
| N50 | 35,725 nt |
| %GC | 55.22% |
| Organism Summary | |
|---|---|
| Name | ATCC® VR-5™ |
| Strain Name | Adenoid 75 |
| Isolation | Spontaneously degenerating tissue culture of adenoid tissue from a 4-year-old girl with enlarged chronically infected tonsils. |
| Tags | |
| Biosafety Level | 2 |
| Annotations Summary |
|---|
| Input Reads Summary | |
|---|---|
| Oxford Nanopore Read Count | 62,030 |
| Oxford Nanopore Median Q Score | 24 |
| Illumina Read Count | 37,159,056 |
| Illumina Mean Coverage Depth | 54,068.377× |
| Illumina Median Q Score | 34 |
Most similar genomes
No genomes with >95% similarity found.
Other members of this genus
No genomes found sharing the same genus.
Sequencing Quality Control
Quality control statistics on Illumina sequencing data.
3 out of 3 passed
PassedMedian Q score, all bases34
PassedPercent of median Q scores per cycle greater than 251%
Ambiguous content (% N bases)0%
Notes
This virus was assembled and curated using Oatmeal v2.1. See our technical documentation for further details: https://docs.onecodex.com/en/articles/5357065-assembly-qc-and-annotation-pipeline-versions
This website uses cookies to ensure you get the best experience on our website. Learn moreDecline