Assembly Summary | |
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Date Published | October 3, 2023 |
Length | 6,381,013 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 7 (0 Circularized) |
N50 | 4,747,268 nt |
%GC | 66.33% |
Organism Summary | |
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Name | ATCC® 27315™ |
Isolation | Urine |
Tags | |
Biosafety Level | 2 |
Type Strain |
Annotations Summary | |
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Number of CDS | 5857 |
Number of Hypothetical Proteins | 489 |
Number of tRNA | 59 |
Number of 5s rRNA | 4 |
Number of 16s rRNA | 4 |
Number of 23s rRNA | 4 |
Input Reads Summary | |
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Oxford Nanopore Read Count | 106,596 |
Oxford Nanopore Median Q Score | 13.6 |
Illumina Read Count | 9,759,238 |
Illumina Mean Coverage Depth | 217.53× |
Illumina Median Q Score | 34 |
Contig | Start | End | Name | Protein Product | EC Number | Type | RefSeq ID | Jump |
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No genomes with >95% similarity found.
No genomes found sharing the same genus.
This bacterium was assembled, annotated, and curated using Oatmeal v1.2. See our technical documentation for further details: https://docs.onecodex.com/en/articles/5357065-assembly-qc-and-annotation-pipeline-versions