Organism Summary | |
---|---|
Catalog Number | ATCC® 4098™ |
Isolation | German white wine yeast |
Biosafety Level | 1 |
Type Strain | No |
Assembly Summary | |
---|---|
Date Published | November 26, 2024 |
Length | 12,572,402 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 29 (0 Circularized) |
N50 | 654,502 nt |
%GC | 38.15% |
Annotations Summary | |
---|---|
Number of BUSCO Annotations | 732 |
Input Reads Summary | |
---|---|
Oxford Nanopore Read Count | 608,469 |
Oxford Nanopore Median Q Score | 33 |
Illumina Read Count | 26,275,384 |
Illumina Mean Coverage Depth | 307.602× |
Illumina Median Q Score | 34 |
Contig | Start | End | Protein Product | Type | OrthoDB Group |
---|
The following genomes have the greatest genomic similarity to this one (≥95% average nucleotide identity):
Taxonomic Name | ATCC Product Page | Strain Alias | Tags | Date Published | Length | Download |
---|
Sequencing Quality Control | |
---|---|
Number of trimmed reads | 26,275,384 |
Median Q score, all bases | 34 |
Percent of median Q scores per cycle greater than 25 | 1% |
Ambiguous content (% N bases) | 0% |
BUSCO Quality Control | |
---|---|
Estimated genome completeness | 96.6% |
Average depth of coverage | 307.602× |
This fungus was assembled, annotated, and curated using Oatmeal v2.1. See our technical documentation for further details: https://docs.onecodex.com/en/articles/5357065-assembly-qc-and-annotation-pipeline-versions