Assembly Summary | |
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Date Published | June 29, 2020 |
Length | 4,789,615 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 5 (1 Circularized) |
Assembly Level | Chromosome |
N50 | 4,517,665 nt |
%GC | 50.73% |
Organism Summary | |
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Name | ATCC® 15669™ |
Isolation | Derived from Escherichia coli K-12 derivative Hfr Cavalli |
Biosafety Level | 1 |
Type Strain | No |
Annotations Summary | |
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Number of CDS | 4,467 |
Number of Hypothetical Proteins | 917 |
Number of tRNA | 88 |
Number of 5s rRNA | 8 |
Number of 16s rRNA | 7 |
Number of 23s rRNA | 7 |
Input Reads Summary | |
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Oxford Nanopore Read Count | 84,938 |
Oxford Nanopore Median Q Score | 25 |
Illumina Read Count | 5,723,670 |
Illumina Mean Coverage Depth | 260.413× |
Illumina Median Q Score | 38 |
Contig | Start | End | Name | Protein Product | EC Number | Type | Uniprot ID | Jump |
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No genomes with >95% similarity found.
No genomes found sharing the same genus.