Assembly Summary | |
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Date Published | June 3, 2024 |
Length | 3,585,826 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 3 (1 Circularized) |
Assembly Level | None |
N50 | 2,855,020 nt |
%GC | 49.03% |
Organism Summary | |
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Name | ATCC® 27375™ |
Isolation | Sugarcane bagasse |
Tags | Type Strain |
Biosafety Level | 2 |
Type Strain | Yes |
Annotations Summary | |
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Number of CDS | 3,470 |
Number of Hypothetical Proteins | 553 |
Number of tRNA | 80 |
Number of 5s rRNA | 7 |
Number of 16s rRNA | 9 |
Number of 23s rRNA | 8 |
Input Reads Summary | |
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Oxford Nanopore Read Count | 157,303 |
Oxford Nanopore Median Q Score | 34 |
Illumina Read Count | 7,709,716 |
Illumina Mean Coverage Depth | 318.423× |
Illumina Median Q Score | 34 |
Contig | Start | End | Name | Protein Product | EC Number | Type | RefSeq ID | Jump |
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No genomes with >95% similarity found.
No genomes found sharing the same genus.
This bacterium was assembled, annotated, and curated using Oatmeal v2.0. See our technical documentation for further details: https://docs.onecodex.com/en/articles/5357065-assembly-qc-and-annotation-pipeline-versions