ATCC® BAA-1451™ | Bartonella volans

Overview

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Quality Control

Organism Summary
Catalog Number	ATCC® BAA-1451™
Strain Alias	FSq-1
Isolation	Glaucomys volans; isolated March 2006
Tags	Type Strain
Biosafety Level	2
Type Strain	Yes

Assembly Summary
Date Published	December 12, 2025
Length	1,878,447 nt
Sequencing Technology	Illumina + Oxford Nanopore Hybrid Assembly
Number of Contigs	1 (All Circularized)
N50	1,878,447 nt
%GC	38.96%

Annotations Summary
Number of CDS	1494
Number of Hypothetical Proteins	188
Number of tRNA	42
Number of 5s rRNA	2
Number of 16s rRNA	2
Number of 23s rRNA	2

Input Reads Summary
Oxford Nanopore Read Count	28,200
Oxford Nanopore Median Q Score	42
Illumina Read Count	4,649,982
Illumina Mean Coverage Depth	593.07×
Illumina Median Q Score	40

The following genomes have the greatest genomic similarity to this one (≥95% average nucleotide identity):

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		Taxonomic Name	ATCC Product Page	Strain Alias	Tags	Date Published	Length

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Sequencing Quality Control

Sequencing Quality Control Metrics
Number of trimmed reads	4,649,982
Median Q score, all bases	40
Percent of median Q scores per cycle greater than 25	1%
Ambiguous content (% N bases)	0%

Assembly Quality Control Metrics
Estimated genome completeness	99.91%
Estimated genome contamination	0.64%
Illumina depth of coverage	593.07×
ONT depth of coverage	164.676×

This bacterium was assembled, annotated, and curated using Oatmeal v3.1. See our technical documentation for further details: https://docs.onecodex.com/en/articles/5357065-assembly-qc-and-annotation-pipeline-versions