Organism Summary | |
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Catalog Number | ATCC® 201388™ |
Strain Alias | BY4741 [ATCC 4040002] |
Genotype | MATa his3delta1 leu2delta0 met15delta0 ura3delta0 |
Isolation | Derived from S288C, ATCC 204508 |
Biosafety Level | 1 |
Type Strain | No |
Assembly Summary | |
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Date Published | October 30, 2020 |
Length | 12,300,878 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 19 (0 Circularized) |
N50 | 930,883 nt |
%GC | 38.18% |
Annotations Summary | |
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Number of BUSCO Annotations | 733 |
Input Reads Summary | |
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Oxford Nanopore Read Count | 300,546 |
Oxford Nanopore Median Q Score | 25 |
Illumina Read Count | 14,383,798 |
Illumina Mean Coverage Depth | 250.631× |
Illumina Median Q Score | 38 |
Contig | Start | End | Protein Product | Type | OrthoDB Group |
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The following genomes have the greatest genomic similarity to this one (≥95% average nucleotide identity):
Taxonomic Name | ATCC Product Page | Strain Alias | Tags | Date Published | Length | Download |
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Sequencing Quality Control | |
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Number of trimmed reads | 14,383,798 |
Median Q score, all bases | 38 |
Percent of median Q scores per cycle greater than 25 | 1% |
Ambiguous content (% N bases) | 0% |
BUSCO Quality Control | |
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Estimated genome completeness | 89.31% |
Average depth of coverage | 250.631× |