Assembly Summary | |
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Date Published | June 14, 2019 |
Length | 4,747,260 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 1 (All Circularized) |
Assembly Level | Complete |
N50 | 4,747,260 nt |
%GC | 50.87% |
Organism Summary | |
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Name | ATCC® 8739™ |
Genotype | This strain has been sequenced at ATCC and does not contain the stx1 or stx2 genes for Shiga toxin production. |
Isolation | Feces |
Biosafety Level | 1 |
Type Strain | No |
Annotations Summary | |
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Number of CDS | 4,453 |
Number of Hypothetical Proteins | 142 |
Number of tRNA | 86 |
Number of 5s rRNA | 8 |
Number of 16s rRNA | 7 |
Number of 23s rRNA | 7 |
Input Reads Summary | |
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Oxford Nanopore Read Count | 66,317 |
Oxford Nanopore Median Q Score | 16 |
Illumina Read Count | 4,254,936 |
Illumina Mean Coverage Depth | 194.241× |
Illumina Median Q Score | 38 |
Contig | Start | End | Name | Protein Product | EC Number | Type | RefSeq ID | Jump |
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No genomes with >95% similarity found.
No genomes found sharing the same genus.