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  • Corynebacterium
  • Corynebacterium accolens

Corynebacterium accolens (ATCC® 49725™)

Overview
Genome Browser
Related Genomes
Quality Control
Assembly Level
Date PublishedDecember 21, 2020
Length2,450,188 nt
Sequencing TechnologyIllumina + Oxford Nanopore Hybrid Assembly
Number of Contigs1 (All Circularized)
Assembly SummaryComplete
N502,450,188 nt
%GC59.57%
Organism Summary
NameATCC® 49725™
IsolationCervix
TagsType Strain
Biosafety Level2
Type StrainYes
Annotations Summary
Number of CDS2,255
Number of Hypothetical Proteins974
Number of tRNA51
Number of 5s rRNA4
Number of 16s rRNA4
Number of 23s rRNA4
Input Reads Summary
Oxford Nanopore Read Count315,197
Oxford Nanopore Median Q Score23
Illumina Read Count5,414,321
Illumina Mean Coverage Depth419.342×
Illumina Median Q Score38
ContigStartEndNameProtein ProductEC NumberTypeUniprot IDJump

Most similar genomes

No genomes with >95% similarity found.

Other members of this genus

No genomes found sharing the same genus.

Sequencing Quality Control

Quality control statistics on Illumina sequencing data.
4/4
4 out of 4 passed
PassedNumber of trimmed reads5,414,321
PassedMedian Q score, all bases38
PassedPercent of median Q scores per cycle greater than 25100%
PassedAmbiguous content (% N bases)0%

Assembly Quality Control

Metrics assessing the assembly quality (from CheckM).
3/3
3 out of 3 passed
PassedEstimated genome completeness99.78%
PassedEstimated genome contamination0%
PassedAverage depth of coverage419.342×
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