ATCC logoHOMEGENOMESSEQUENCE SEARCH
DOCUMENTATION
  • Butyrivibrio
  • Butyrivibrio proteoclasticus

Butyrivibrio proteoclasticus (ATCC® 51982™)

Overview
Genome Browser
Related Genomes
Quality Control
Assembly Summary
Date PublishedAugust 27, 2019
Length4,407,011 nt
Sequencing TechnologyIllumina + Oxford Nanopore Hybrid Assembly
Number of Contigs4 (All Circularized)
Assembly LevelComplete
N503,556,930 nt
%GC40.01%
Organism Summary
NameATCC® 51982™
IsolationRumen
TagsType Strain
Biosafety Level1
Type StrainYes
Annotations Summary
Number of CDS3,854
Number of Hypothetical Proteins2,273
Number of tRNA53
Number of 5s rRNA6
Number of 16s rRNA6
Number of 23s rRNA6
Input Reads Summary
Oxford Nanopore Read Count117,935
Oxford Nanopore Median Q Score20
Illumina Read Count10,320,381
Illumina Mean Coverage Depth503.304×
Illumina Median Q Score38
ContigStartEndNameProtein ProductEC NumberTypeUniprot IDJump

Most similar genomes

No genomes with >95% similarity found.

Other members of this genus

No genomes found sharing the same genus.

Sequencing Quality Control

Quality control statistics on Illumina sequencing data.
4/4
4 out of 4 passed
PassedNumber of trimmed reads10,320,381
PassedMedian Q score, all bases38
PassedPercent of median Q scores per cycle greater than 25100%
PassedAmbiguous content (% N bases)0%

Assembly Quality Control

Metrics assessing the assembly quality (from CheckM).
3/3
3 out of 3 passed
PassedEstimated genome completeness99.58%
PassedEstimated genome contamination0%
PassedAverage depth of coverage503.304×
Powered byOne Codex
Enhanced Authentication InitiativeData Use AgreementNeed Help? Contact us at ATCC Support
This website uses cookies to ensure you get the best experience on our website. Learn moreDecline