As of May 2024, to guarantee the long-term sustainability of the portal and to continue to provide you with reference-quality genomes, we have transitioned the ATCC Genome Portal over to a supporting membership service. Learn more about ATCC supporting memberships here.
- Fowl aviadenovirus D
- Avian adenovirus Type 2
Avian adenovirus Type 2 (ATCC® VR-280™)
Overview
Related Genomes
Quality Control
| Assembly Summary | |
|---|---|
| Date Published | June 3, 2024 |
| Length | 43,885 nt |
| Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
| Number of Segments | 3 |
| Assembly Level | Complete |
| N50 | 25,957 nt |
| %GC | 53.25% |
| Organism Summary | |
|---|---|
| Name | ATCC® VR-280™ |
| Isolation | Pool of liver tissues (L29) from 5 chickens inoculated with 17th cell-free passage of the RPL 12 strain of avian leukosis. |
| Biosafety Level | 2 |
| Annotations Summary |
|---|
| Input Reads Summary | |
|---|---|
| Oxford Nanopore Read Count | 73,563 |
| Oxford Nanopore Median Q Score | 26 |
| Illumina Read Count | 19,610,978 |
| Illumina Mean Coverage Depth | 49,063.921× |
| Illumina Median Q Score | 34 |
Most similar genomes
No genomes with >95% similarity found.
Other members of this genus
No genomes found sharing the same genus.
Sequencing Quality Control
Quality control statistics on Illumina sequencing data.
3 out of 3 passed
PassedMedian Q score, all bases34
PassedPercent of median Q scores per cycle greater than 25100%
PassedAmbiguous content (% N bases)0.02%
Notes
This virus was assembled and curated using Oatmeal v2.0. See our technical documentation for further details: https://docs.onecodex.com/en/articles/5357065-assembly-qc-and-annotation-pipeline-versions
This website uses cookies to ensure you get the best experience on our website. Learn moreDecline