Assembly Summary | |
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Date Published | April 5, 2023 |
Length | 5,205,705 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 14 (10 Circularized) |
Assembly Level | Chromosome |
N50 | 4,418,996 nt |
%GC | 53.83% |
Organism Summary | |
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Name | ATCC® 8199™ |
Isolation | Sweet corn (Zea mays var. Rugosa) |
Tags | Type Strain |
Biosafety Level | 1 |
Type Strain | Yes |
Annotations Summary | |
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Number of CDS | 5,339 |
Number of Hypothetical Proteins | 2,229 |
Number of tRNA | 74 |
Number of 5s rRNA | 7 |
Number of 16s rRNA | 7 |
Number of 23s rRNA | 7 |
Input Reads Summary | |
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Oxford Nanopore Read Count | 58,865 |
Oxford Nanopore Median Q Score | 25 |
Illumina Read Count | 5,584,912 |
Illumina Mean Coverage Depth | 124.502× |
Illumina Median Q Score | 34 |
Contig | Start | End | Name | Protein Product | EC Number | Type | Uniprot ID | Jump |
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No genomes with >95% similarity found.
No genomes found sharing the same genus.