Assembly Summary | |
---|---|
Date Published | February 26, 2020 |
Length | 5,506,416 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 9 (3 Circularized) |
Assembly Level | Chromosome |
N50 | 5,119,813 nt |
%GC | 50.34% |
Organism Summary | |
---|---|
Name | ATCC® 43888™ |
Isolation | Feces |
Biosafety Level | 1 |
Type Strain | No |
Annotations Summary | |
---|---|
Number of CDS | 5,234 |
Number of Hypothetical Proteins | 1,614 |
Number of tRNA | 102 |
Number of 5s rRNA | 8 |
Number of 16s rRNA | 7 |
Number of 23s rRNA | 7 |
Input Reads Summary | |
---|---|
Oxford Nanopore Read Count | 97,078 |
Oxford Nanopore Median Q Score | 22 |
Illumina Read Count | 4,264,475 |
Illumina Mean Coverage Depth | 170.91× |
Illumina Median Q Score | 38 |
Contig | Start | End | Name | Protein Product | EC Number | Type | Uniprot ID | Jump |
---|
No genomes with >95% similarity found.
No genomes found sharing the same genus.