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  • Achromobacter
  • Achromobacter xylosoxidans

Achromobacter xylosoxidans (ATCC® 27063™)

Overview
Genome Browser
Related Genomes
Quality Control
Assembly Level
Date PublishedDecember 12, 2022
Length6,533,144 nt
Sequencing TechnologyIllumina + Oxford Nanopore Hybrid Assembly
Number of Contigs2 (0 Circularized)
Assembly SummaryChromosome
N503,736,923 nt
%GC67.64%
Organism Summary
NameATCC® 27063™
IsolationEar discharge
Biosafety Level2
Type StrainNo
Annotations Summary
Number of CDS5,842
Number of Hypothetical Proteins2,410
Number of tRNA66
Number of 5s rRNA4
Number of 16s rRNA3
Number of 23s rRNA3
Input Reads Summary
Oxford Nanopore Read Count47,520
Oxford Nanopore Median Q Score22
Illumina Read Count9,062,266
Illumina Mean Coverage Depth192.66×
Illumina Median Q Score34
ContigStartEndNameProtein ProductEC NumberTypeUniprot IDJump

Most similar genomes

No genomes with >95% similarity found.

Other members of this genus

No genomes found sharing the same genus.

Sequencing Quality Control

Quality control statistics on Illumina sequencing data.
4/4
4 out of 4 passed
PassedNumber of trimmed reads9,062,266
PassedMedian Q score, all bases34
PassedPercent of median Q scores per cycle greater than 25100%
PassedAmbiguous content (% N bases)0%

Assembly Quality Control

Metrics assessing the assembly quality (from CheckM).
3/3
3 out of 3 passed
PassedEstimated genome completeness99.53%
PassedEstimated genome contamination0.47%
PassedAverage depth of coverage192.66×
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