Assembly Summary | |
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Date Published | February 26, 2020 |
Length | 3,018,022 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 6 (2 Circularized) |
Assembly Level | Chromosome |
N50 | 1,809,071 nt |
%GC | 27.05% |
Organism Summary | |
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Name | ATCC® 27164™ |
Isolation | Swine dysentery |
Tags | Type Strain |
Biosafety Level | 1 |
Type Strain | Yes |
Annotations Summary | |
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Number of CDS | 2,609 |
Number of Hypothetical Proteins | 480 |
Number of tRNA | 33 |
Number of 5s rRNA | 1 |
Number of 16s rRNA | 1 |
Number of 23s rRNA | 1 |
Input Reads Summary | |
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Oxford Nanopore Read Count | 25,603 |
Oxford Nanopore Median Q Score | 24 |
Illumina Read Count | 3,204,125 |
Illumina Mean Coverage Depth | 205.084× |
Illumina Median Q Score | 38 |
Contig | Start | End | Name | Protein Product | EC Number | Type | RefSeq ID | Jump |
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No genomes with >95% similarity found.
No genomes found sharing the same genus.