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  • Methylobacillus
  • Methylobacillus flagellatus

Methylobacillus flagellatus (ATCC® 51484™)

Overview
Genome Browser
Related Genomes
Quality Control
Assembly Summary
Date PublishedFebruary 26, 2020
Length2,822,956 nt
Sequencing TechnologyIllumina + Oxford Nanopore Hybrid Assembly
Number of Contigs6 (0 Circularized)
Assembly LevelChromosome
N501,816,458 nt
%GC55.76%
Organism Summary
NameATCC® 51484™
IsolationSewage system
TagsType Strain
Biosafety Level1
Type StrainYes
Annotations Summary
Number of CDS2,676
Number of Hypothetical Proteins1,090
Number of tRNA44
Number of 5s rRNA1
Number of 16s rRNA1
Number of 23s rRNA1
Input Reads Summary
Oxford Nanopore Read Count214,732
Oxford Nanopore Median Q Score24
Illumina Read Count4,327,128
Illumina Mean Coverage Depth294.775×
Illumina Median Q Score38
ContigStartEndNameProtein ProductEC NumberTypeUniprot IDJump

Most similar genomes

No genomes with >95% similarity found.

Other members of this genus

No genomes found sharing the same genus.

Sequencing Quality Control

Quality control statistics on Illumina sequencing data.
4/4
4 out of 4 passed
PassedNumber of trimmed reads4,327,128
PassedMedian Q score, all bases38
PassedPercent of median Q scores per cycle greater than 25100%
PassedAmbiguous content (% N bases)0%

Assembly Quality Control

Metrics assessing the assembly quality (from CheckM).
3/3
3 out of 3 passed
PassedEstimated genome completeness99.36%
PassedEstimated genome contamination0%
PassedAverage depth of coverage294.775×
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