ATCC® VR-636™ | Felid herpesvirus 1

Overview

Related Genomes

Quality Control

Organism Summary
Catalog Number	ATCC® VR-636™
Strain Alias	C-27
Isolation	Throat and conjunctiva swab from cat with respiratory infection.
Biosafety Level	2

Assembly Summary
Date Published	November 21, 2025
Length	137,912 nt
Sequencing Technology	Illumina + Oxford Nanopore Hybrid Assembly
Number of Contigs	2 (0 Circularized)
Assembly Level	Complete
N50	105,917 nt
%GC	45.79%

Annotations Summary
Number of CDS	108

Input Reads Summary
Oxford Nanopore Read Count	533,725
Oxford Nanopore Median Q Score	30
Illumina Read Count	37,802,002
Illumina Mean Coverage Depth	93.51×
Illumina Median Q Score	34

The following genomes have the greatest genomic similarity to this one (≥95% average nucleotide identity):

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		Taxonomic Name	ATCC Product Page	Strain Alias	Tags	Date Published	Length

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Sequencing Quality Control

Sequencing Quality Control Metrics
Median Q score, all bases	34
Percent of median Q scores per cycle greater than 25	1%
Ambiguous content (% N bases)	0%

This virus was assembled and curated using Oatmeal v3.1. See our technical documentation for further details: https://docs.onecodex.com/en/articles/5357065-assembly-qc-and-annotation-pipeline-versions