Purchased a strain from ATCC? Enter in the lot number to download the genome or learn more about our supporting memberships here.
- Alphainfluenzavirus influenzae
- Influenza A virus
Influenza A virus (ATCC® VR-1882™)
Overview
Related Genomes
Quality Control
| Assembly Summary | |
|---|---|
| Date Published | July 1, 2021 |
| Length | 13,472 nt |
| Sequencing Technology | Illumina |
| Number of Segments | 8 |
| Assembly Level | Complete |
| N50 | 2,201 nt |
| %GC | 42.94% |
| Organism Summary | |
|---|---|
| Name | ATCC® VR-1882™ |
| Isolation | Isolated from a human |
| Biosafety Level | 2 |
| Annotations Summary |
|---|
| Input Reads Summary | |
|---|---|
| Illumina Read Count | 300,018 |
| Illumina Mean Coverage Depth | 1,384.946× |
| Illumina Median Q Score | 38 |
Most similar genomes
No genomes with >95% similarity found.
Other members of this genus
No genomes found sharing the same genus.
Sequencing Quality Control
Quality control statistics on Illumina sequencing data.
2 out of 3 passed, 1 failed
PassedMedian Q score, all bases38
FailedPercent of median Q scores per cycle greater than 2599.34%
PassedAmbiguous content (% N bases)0%
Notes
This virus was assembled and curated using Oatmeal v3.0. See our technical documentation for further details: https://docs.onecodex.com/en/articles/5357065-assembly-qc-and-annotation-pipeline-versions
This website uses cookies to ensure you get the best experience on our website. Learn moreDecline