Organism Summary | |
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Catalog Number | ATCC® 11202™ |
Isolation | Deteriorating material |
Biosafety Level | 1 |
Type Strain | No |
Assembly Summary | |
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Date Published | August 8, 2023 |
Length | 30,209,616 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 7 (0 Circularized) |
N50 | 4,630,942 nt |
%GC | 56.45% |
Annotations Summary | |
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Number of BUSCO Annotations | 753 |
Input Reads Summary | |
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Oxford Nanopore Read Count | 489,293 |
Oxford Nanopore Median Q Score | 23 |
Illumina Read Count | 34,868,335 |
Illumina Mean Coverage Depth | 148.758× |
Illumina Median Q Score | 34 |
Contig | Start | End | Protein Product | Type | OrthoDB Group |
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The following genomes have the greatest genomic similarity to this one (≥95% average nucleotide identity):
Taxonomic Name | ATCC Product Page | Strain Alias | Tags | Date Published | Length | Download |
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Sequencing Quality Control | |
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Number of trimmed reads | 34,868,335 |
Median Q score, all bases | 34 |
Percent of median Q scores per cycle greater than 25 | 1% |
Ambiguous content (% N bases) | 0% |
BUSCO Quality Control | |
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Estimated genome completeness | 99.21% |
Average depth of coverage | 148.758× |