| Organism Summary | |
|---|---|
| Catalog Number | ATCC® 29630™ | 
| Strain Alias | TA 1537 | 
| Biosafety Level | 2 | 
| Type Strain | No | 
| Assembly Summary | |
|---|---|
| Date Published | August 1, 2022 | 
| Length | 4,853,485 nt | 
| Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly | 
| Number of Contigs | 2 (All Circularized) | 
| N50 | 4,759,552 nt | 
| %GC | 52.23% | 
| Annotations Summary | |
|---|---|
| Number of CDS | 4614 | 
| Number of Hypothetical Proteins | 193 | 
| Number of tRNA | 85 | 
| Number of 5s rRNA | 8 | 
| Number of 16s rRNA | 7 | 
| Number of 23s rRNA | 7 | 
| Input Reads Summary | |
|---|---|
| Oxford Nanopore Read Count | 290,124 | 
| Oxford Nanopore Median Q Score | 24 | 
| Illumina Read Count | 18,392,967 | 
| Illumina Mean Coverage Depth | 531.128× | 
| Illumina Median Q Score | 34 | 
| Contig | Start | End | Name | Protein Product | EC Number | Type | RefSeq ID | Jump | 
|---|
The following genomes have the greatest genomic similarity to this one (≥95% average nucleotide identity):
| Taxonomic Name | ATCC Product Page | Strain Alias | Tags | Date Published | Length | Download | 
|---|
| Sequencing Quality Control | |
|---|---|
| Number of trimmed reads | 18,392,967 | 
| Median Q score, all bases | 34 | 
| Percent of median Q scores per cycle greater than 25 | 1% | 
| Ambiguous content (% N bases) | 0% | 
| Assembly Quality Control | |
|---|---|
| Estimated genome completeness | 96.85% | 
| Estimated genome contamination | 0.04% | 
| Illumina depth of coverage | 531.128× |