Organism Summary | |
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Catalog Number | ATCC® 9643™ |
Strain Alias | SN 3 [Aust. Mycol. Panel 3, CBS 131.61, DSM 1959, Harvard 997, IFO 6343, IMI 91856, NRRL A-3537, NRRL A-5244, QM 380, RIB 1403] |
Isolation | Shoe sole |
Biosafety Level | 1 |
Type Strain | No |
Assembly Summary | |
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Date Published | December 22, 2020 |
Length | 38,444,343 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 9 (0 Circularized) |
N50 | 4,752,763 nt |
%GC | 47.3% |
Annotations Summary | |
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Number of BUSCO Annotations | 757 |
Input Reads Summary | |
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Oxford Nanopore Read Count | 149,637 |
Oxford Nanopore Median Q Score | 24 |
Illumina Read Count | 50,978,742 |
Illumina Mean Coverage Depth | 183.496× |
Illumina Median Q Score | 37 |
Contig | Start | End | Protein Product | Type | OrthoDB Group |
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The following genomes have the greatest genomic similarity to this one (≥95% average nucleotide identity):
Taxonomic Name | ATCC Product Page | Strain Alias | Tags | Date Published | Length | Download |
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Sequencing Quality Control | |
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Number of trimmed reads | 50,978,742 |
Median Q score, all bases | 37 |
Percent of median Q scores per cycle greater than 25 | 1% |
Ambiguous content (% N bases) | 0% |
BUSCO Quality Control | |
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Estimated genome completeness | 98.94% |
Average depth of coverage | 183.496× |