NEW: View our new taxonomic tree view of all microbial products!
Purchased a product from ATCC? Enter in the lot number to download the omics data or learn more about our supporting memberships here.
Purchased a product from ATCC? Enter in the lot number to download the omics data or learn more about our supporting memberships here.
Overview
Related Genomes
Quality Control
Organism Summary | |
|---|---|
| Catalog Number | ATCC® VR-95™ |
| Strain Alias | A/PR/8/34 |
| Isolation | Patient |
| Biosafety Level | 2 |
Assembly Summary | |
|---|---|
| Date Published | September 2, 2021 |
| Length | 12,670 nt |
| Sequencing Technology | Illumina |
| Number of Contigs | 7 (0 Circularized) |
| Assembly Level | Complete |
| N50 | 2,282 nt |
| %GC | 43.4% |
Annotations Summary | |
|---|---|
| Number of CDS | 8 |
Input Reads Summary | |
|---|---|
| Oxford Nanopore Read Count | 0 |
| Oxford Nanopore Median Q Score | 0 |
| Illumina Read Count | 2,692,876 |
| Illumina Mean Coverage Depth | 10,175.702× |
| Illumina Median Q Score | 37 |
Most similar genomes
The following genomes have the greatest genomic similarity to this one (≥95% average nucleotide identity):
All Microbes
0 out of 0 selected (Select All / Deselect All).
| Taxonomic Name | ATCC Product Page | Strain Alias | Tags | Date Published | Length |
|---|
Displaying Product
Sequencing Quality Control
Sequencing Quality Control Metrics | |
|---|---|
| Median Q score, all bases | 37 |
| Percent of median Q scores per cycle greater than 25 | 1% |
| Ambiguous content (% N bases) | 0% |
Notes
This virus was assembled and curated using Oatmeal v3.1. See our technical documentation for further details: https://docs.onecodex.com/en/articles/5357065-assembly-qc-and-annotation-pipeline-versions
This website uses cookies to ensure you get the best experience on our website. Learn moreDecline