Assembly Summary | |
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Date Published | October 3, 2023 |
Length | 2,180,410 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 8 (1 Circularized) |
Assembly Level | Chromosome |
N50 | 654,020 nt |
%GC | 51.67% |
Organism Summary | |
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Name | ATCC® 700344™ |
Isolation | Clinical isolate |
Biosafety Level | 2 |
Type Strain | No |
Annotations Summary | |
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Number of CDS | 2,110 |
Number of Hypothetical Proteins | 284 |
Number of tRNA | 58 |
Number of 5s rRNA | 3 |
Number of 16s rRNA | 3 |
Number of 23s rRNA | 3 |
Input Reads Summary | |
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Oxford Nanopore Read Count | 28,079 |
Oxford Nanopore Median Q Score | 13.5 |
Illumina Read Count | 9,631,746 |
Illumina Mean Coverage Depth | 650.231× |
Illumina Median Q Score | 34 |
Contig | Start | End | Name | Protein Product | EC Number | Type | RefSeq ID | Jump |
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No genomes with >95% similarity found.
No genomes found sharing the same genus.
This bacterium was assembled, annotated, and curated using Oatmeal v1.2. See our technical documentation for further details: https://docs.onecodex.com/en/articles/5357065-assembly-qc-and-annotation-pipeline-versions