Organism Summary | |
---|---|
Catalog Number | ATCC® VR-1610™ |
Isolation | Feces from human diabetic; derived from ATCC VR-913 following treatment to remove Mycoplasma contamination. |
Biosafety Level | 2 |
Assembly Summary | |
---|---|
Date Published | September 13, 2024 |
Length | 34,903 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 1 (0 Circularized) |
Assembly Level | Complete |
N50 | 34,903 nt |
%GC | 57.24% |
Annotations Summary |
---|
Input Reads Summary | |
---|---|
Oxford Nanopore Read Count | 54,834 |
Oxford Nanopore Median Q Score | 28 |
Illumina Read Count | 3,189,594 |
Illumina Mean Coverage Depth | 10,798.072× |
Illumina Median Q Score | 38 |
The following genomes have the greatest genomic similarity to this one (≥95% average nucleotide identity):
Taxonomic Name | ATCC Product Page | Strain Alias | Tags | Date Published | Length | Download |
---|
Sequencing Quality Control | |
---|---|
Median Q score, all bases | 38 |
Percent of median Q scores per cycle greater than 25 | 1% |
Ambiguous content (% N bases) | 0% |
This virus was assembled and curated using Oatmeal v2.1. See our technical documentation for further details: https://docs.onecodex.com/en/articles/5357065-assembly-qc-and-annotation-pipeline-versions