Assembly Summary | |
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Date Published | September 5, 2023 |
Length | 6,236,187 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 1 (All Circularized) |
Assembly Level | Complete |
N50 | 6,236,187 nt |
%GC | 60.37% |
Organism Summary | |
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Name | ATCC® TSD-342™ |
Isolation | Stem gall of cranberry plant |
Tags | Type Strain |
Biosafety Level | 1 |
Type Strain | Yes |
Annotations Summary | |
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Number of CDS | 5,509 |
Number of Hypothetical Proteins | 2,388 |
Number of tRNA | 74 |
Number of 5s rRNA | 7 |
Number of 16s rRNA | 6 |
Number of 23s rRNA | 6 |
Input Reads Summary | |
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Oxford Nanopore Read Count | 145,397 |
Oxford Nanopore Median Q Score | 24 |
Illumina Read Count | 19,930,796 |
Illumina Mean Coverage Depth | 438.612× |
Illumina Median Q Score | 34 |
Contig | Start | End | Name | Protein Product | EC Number | Type | Uniprot ID | Jump |
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No genomes with >95% similarity found.
No genomes found sharing the same genus.