ATCC® 16910™ | Aspergillus penicillioides | ATCC Genome Portal

Overview

Annotations

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Quality Control

Organism Summary
Catalog Number	ATCC® 16910™
Strain Alias	WB 4548 [5729; IMUR 540, CBS 540.65, IMI 211392]
Genotype	ura3delta his3 : : URA3 trpl : : URA3
Isolation	Skin of patient with lobomycosis
Tags	Type Strain
Biosafety Level	1
Type Strain	Yes

Assembly Summary
Date Published	February 1, 2024
Length	27,191,008 nt
Sequencing Technology	Illumina + Oxford Nanopore Hybrid Assembly
Number of Contigs	12 (0 Circularized)
N50	3,670,735 nt
%GC	48.7%

Annotations Summary
Number of BUSCO Annotations	754

Input Reads Summary
Oxford Nanopore Read Count	592,871
Oxford Nanopore Median Q Score	25
Illumina Read Count	31,587,456
Illumina Mean Coverage Depth	144.486×
Illumina Median Q Score	34

Most similar genomes

The following genomes have the greatest genomic similarity to this one (≥95% average nucleotide identity):

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		Taxonomic Name	ATCC Product Page	Strain Alias	Tags	Date Published	Length

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Sequencing Quality Control

Sequencing Quality Control Metrics
Number of trimmed reads	31,587,456
Median Q score, all bases	34
Percent of median Q scores per cycle greater than 25	1%
Ambiguous content (% N bases)	0%

BUSCO Quality Control

BUSCO Quality Control Metrics
Estimated genome completeness	98.81%
Average depth of coverage	144.486×