Assembly Summary | |
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Date Published | October 3, 2023 |
Length | 3,090,811 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 4 (All Circularized) |
Assembly Level | Complete |
N50 | 2,911,816 nt |
%GC | 52.67% |
Organism Summary | |
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Name | ATCC® 35652™ |
Isolation | Potato-processing effluent |
Tags | Type Strain |
Biosafety Level | 1 |
Type Strain | Yes |
Annotations Summary | |
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Number of CDS | 3,099 |
Number of Hypothetical Proteins | 472 |
Number of tRNA | 67 |
Number of 5s rRNA | 10 |
Number of 16s rRNA | 9 |
Number of 23s rRNA | 9 |
Input Reads Summary | |
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Oxford Nanopore Read Count | 475,932 |
Oxford Nanopore Median Q Score | 13.3 |
Illumina Read Count | 8,897,226 |
Illumina Mean Coverage Depth | 421.08× |
Illumina Median Q Score | 34 |
Contig | Start | End | Name | Protein Product | EC Number | Type | RefSeq ID | Jump |
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No genomes with >95% similarity found.
No genomes found sharing the same genus.
This bacterium was assembled, annotated, and curated using Oatmeal v1.2. See our technical documentation for further details: https://docs.onecodex.com/en/articles/5357065-assembly-qc-and-annotation-pipeline-versions