Assembly Summary | |
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Date Published | March 27, 2020 |
Length | 6,721,840 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 4 (2 Circularized) |
Assembly Level | Chromosome |
N50 | 3,560,435 nt |
%GC | 67.63% |
Organism Summary | |
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Name | ATCC® 700388™ |
Isolation | Soil from rice field in Central Thailand |
Tags | Type Strain |
Biosafety Level | 1 |
Type Strain | Yes |
Annotations Summary | |
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Number of CDS | 5,643 |
Number of Hypothetical Proteins | 2,537 |
Number of tRNA | 72 |
Number of 5s rRNA | 4 |
Number of 16s rRNA | 4 |
Number of 23s rRNA | 4 |
Input Reads Summary | |
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Oxford Nanopore Read Count | 10,554 |
Oxford Nanopore Median Q Score | 15 |
Illumina Read Count | 3,897,801 |
Illumina Mean Coverage Depth | 117.057× |
Illumina Median Q Score | 38 |
Contig | Start | End | Name | Protein Product | EC Number | Type | Uniprot ID | Jump |
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No genomes with >95% similarity found.
No genomes found sharing the same genus.