ATCC® BAA-400™ | Meiothermus taiwanensis

Overview

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Quality Control

Organism Summary
Catalog Number	ATCC® BAA-400™
Strain Alias	WR-220 [CCRC-17171]
Isolation	Wu-rai Hot Springs; isolated October 1998
Biosafety Level	1
Type Strain	No

Assembly Summary
Date Published	March 24, 2025
Length	3,070,164 nt
Sequencing Technology	Illumina + Oxford Nanopore Hybrid Assembly
Number of Contigs	2 (All Circularized)
N50	2,799,103 nt
%GC	63.51%

Annotations Summary
Number of CDS	2969
Number of Hypothetical Proteins	423
Number of tRNA	47
Number of 5s rRNA	2
Number of 16s rRNA	2
Number of 23s rRNA	2

Input Reads Summary
Oxford Nanopore Read Count	28,998
Oxford Nanopore Median Q Score	32
Illumina Read Count	1,951,036
Illumina Mean Coverage Depth	176.323×
Illumina Median Q Score	40

The following genomes have the greatest genomic similarity to this one (≥95% average nucleotide identity):

All Genomes

	Taxonomic Name	ATCC Product Page	Strain Alias	Tags	Date Published	Length	Download

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Sequencing Quality Control
Number of trimmed reads	1,951,036
Median Q score, all bases	40
Percent of median Q scores per cycle greater than 25	1%
Ambiguous content (% N bases)	0%

Assembly Quality Control
Estimated genome completeness	99.57%
Estimated genome contamination	0%
Illumina depth of coverage	176.323×
ONT depth of coverage	29.735×

Notes

This bacterium was assembled, annotated, and curated using Oatmeal v2.1. See our technical documentation for further details: https://docs.onecodex.com/en/articles/5357065-assembly-qc-and-annotation-pipeline-versions