ATCC® MYA-3627™ | Aspergillus fumigatus

Overview

Annotations

Related Genomes

Quality Control

Assembly Summary
Date Published	February 21, 2025
Length	28,781,324 nt
Sequencing Technology	Illumina + Oxford Nanopore Hybrid Assembly
Number of Contigs	21
Assembly Level	Scaffold
N50	2,670,298 nt
%GC	49.4%

Organism Summary
Name	ATCC® MYA-3627™
Isolation	St. Vincent's Medical Center
Biosafety Level	2
Type Strain	No

Annotations Summary
Number of BUSCO Annotations	756

Input Reads Summary
Oxford Nanopore Read Count	234,679
Oxford Nanopore Median Q Score	34
Illumina Read Count	69,083,816
Illumina Mean Coverage Depth	356.083×
Illumina Median Q Score	40

Sequencing Quality Control

Quality control statistics on Illumina sequencing data.

4 out of 4 passed

PassedNumber of trimmed reads69,083,816

PassedMedian Q score, all bases40

PassedPercent of median Q scores per cycle greater than 25100%

PassedAmbiguous content (% N bases)0.01%

BUSCO Quality Control

Metrics assessing the assembly quality (from BUSCO).

2 out of 2 passed

PassedEstimated genome completeness99.7%

PassedAverage depth of coverage356.083×

Notes

This fungus was assembled, annotated, and curated using Oatmeal v2.1. See our technical documentation for further details: https://docs.onecodex.com/en/articles/5357065-assembly-qc-and-annotation-pipeline-versions

Aspergillus fumigatus (ATCC® MYA-3627™)