ATCC® 51571™ | Actinobacillus capsulatus

Overview

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Quality Control

Assembly Summary
Date Published	September 16, 2025
Length	2,708,178 nt
Sequencing Technology	Illumina + Oxford Nanopore Hybrid Assembly
Number of Contigs	1 (0 Circularized)
N50	2,708,178 nt
%GC	40.18%

Annotations Summary
Number of CDS	2554
Number of Hypothetical Proteins	261
Number of tRNA	63
Number of 5s rRNA	6
Number of 16s rRNA	6
Number of 23s rRNA	6

Input Reads Summary
Oxford Nanopore Read Count	108,906
Oxford Nanopore Median Q Score	41
Illumina Read Count	2,012,700
Illumina Mean Coverage Depth	184.511×
Illumina Median Q Score	40

The following genomes have the greatest genomic similarity to this one (≥95% average nucleotide identity):

All Genomes

	Taxonomic Name	ATCC Product Page	Strain Alias	Tags	Date Published	Length	Download

Displaying Genome

Sequencing Quality Control
Number of trimmed reads	2,012,700
Median Q score, all bases	40
Percent of median Q scores per cycle greater than 25	1%
Ambiguous content (% N bases)	0%

Assembly Quality Control
Estimated genome completeness	98.71%
Estimated genome contamination	0.2%
Illumina depth of coverage	184.511×
ONT depth of coverage	251.564×

Notes

This bacterium was assembled, annotated, and curated using Oatmeal v3.0. See our technical documentation for further details: https://docs.onecodex.com/en/articles/5357065-assembly-qc-and-annotation-pipeline-versions