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  • Acinetobacter calcoaceticus/baumannii complex
  • Acinetobacter baumannii

Acinetobacter baumannii (ATCC® BAA-1796™)

Overview
Genome Browser
Related Genomes
Quality Control
Assembly Summary
Date PublishedJuly 30, 2021
Length4,136,055 nt
Sequencing TechnologyIllumina + Oxford Nanopore Hybrid Assembly
Number of Contigs4 (All Circularized)
Assembly LevelComplete
N503,909,431 nt
%GC39.17%
Organism Summary
NameATCC® BAA-1796™
IsolationSputum
Biosafety Level2
Type StrainNo
Annotations Summary
Number of CDS3,954
Number of Hypothetical Proteins1,824
Number of tRNA75
Number of 5s rRNA6
Number of 16s rRNA6
Number of 23s rRNA6
Input Reads Summary
Oxford Nanopore Read Count45,590
Oxford Nanopore Median Q Score27
Illumina Read Count22,947,445
Illumina Mean Coverage Depth783.176×
Illumina Median Q Score34
ContigStartEndNameProtein ProductEC NumberTypeUniprot IDJump

Most similar genomes

No genomes with >95% similarity found.

Other members of this genus

No genomes found sharing the same genus.

Sequencing Quality Control

Quality control statistics on Illumina sequencing data.
4/4
4 out of 4 passed
PassedNumber of trimmed reads22,947,445
PassedMedian Q score, all bases34
PassedPercent of median Q scores per cycle greater than 25100%
PassedAmbiguous content (% N bases)0%

Assembly Quality Control

Metrics assessing the assembly quality (from CheckM).
3/3
3 out of 3 passed
PassedEstimated genome completeness99.98%
PassedEstimated genome contamination0.71%
PassedAverage depth of coverage783.176×
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