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  • Acinetobacter calcoaceticus/baumannii complex
  • Acinetobacter baumannii

Acinetobacter baumannii (ATCC® BAA-2898™)

Overview
Genome Browser
Related Genomes
Quality Control
Assembly Level
Date PublishedMarch 27, 2020
Length4,242,509 nt
Sequencing TechnologyIllumina + Oxford Nanopore Hybrid Assembly
Number of Contigs5 (All Circularized)
Assembly SummaryComplete
N503,948,803 nt
%GC39.12%
Organism Summary
NameATCC® BAA-2898™
IsolationWound
Biosafety Level2
Type StrainNo
Annotations Summary
Number of CDS4,081
Number of Hypothetical Proteins1,904
Number of tRNA73
Number of 5s rRNA6
Number of 16s rRNA6
Number of 23s rRNA6
Input Reads Summary
Oxford Nanopore Read Count149,866
Oxford Nanopore Median Q Score24
Illumina Read Count5,548,337
Illumina Mean Coverage Depth304.028×
Illumina Median Q Score38
ContigStartEndNameProtein ProductEC NumberTypeUniprot IDJump

Most similar genomes

No genomes with >95% similarity found.

Other members of this genus

No genomes found sharing the same genus.

Sequencing Quality Control

Quality control statistics on Illumina sequencing data.
4/4
4 out of 4 passed
PassedNumber of trimmed reads5,548,337
PassedMedian Q score, all bases38
PassedPercent of median Q scores per cycle greater than 25100%
PassedAmbiguous content (% N bases)0%

Assembly Quality Control

Metrics assessing the assembly quality (from CheckM).
3/3
3 out of 3 passed
PassedEstimated genome completeness99.98%
PassedEstimated genome contamination0.61%
PassedAverage depth of coverage304.028×
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