| Organism Summary | |
|---|---|
| Catalog Number | ATCC® 9793™ | 
| Biosafety Level | 2 | 
| Type Strain | No | 
| Assembly Summary | |
|---|---|
| Date Published | June 10, 2025 | 
| Length | 2,203,179 nt | 
| Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly | 
| Number of Contigs | 4 (2 Circularized) | 
| N50 | 2,102,526 nt | 
| %GC | 52.27% | 
| Annotations Summary | |
|---|---|
| Number of CDS | 2272 | 
| Number of Hypothetical Proteins | 361 | 
| Number of tRNA | 56 | 
| Number of 5s rRNA | 4 | 
| Number of 16s rRNA | 4 | 
| Number of 23s rRNA | 4 | 
| Input Reads Summary | |
|---|---|
| Oxford Nanopore Read Count | 130,365 | 
| Oxford Nanopore Median Q Score | 36 | 
| Illumina Read Count | 6,225,052 | 
| Illumina Mean Coverage Depth | 418.659× | 
| Illumina Median Q Score | 40 | 
| Contig | Start | End | Name | Protein Product | EC Number | Type | RefSeq ID | Jump | 
|---|
The following genomes have the greatest genomic similarity to this one (≥95% average nucleotide identity):
| Taxonomic Name | ATCC Product Page | Strain Alias | Tags | Date Published | Length | Download | 
|---|
| Sequencing Quality Control | |
|---|---|
| Number of trimmed reads | 6,225,052 | 
| Median Q score, all bases | 40 | 
| Percent of median Q scores per cycle greater than 25 | 1% | 
| Ambiguous content (% N bases) | 0% | 
| Assembly Quality Control | |
|---|---|
| Estimated genome completeness | 98.18% | 
| Estimated genome contamination | 0.23% | 
| Illumina depth of coverage | 418.659× | 
| ONT depth of coverage | 421.008× | 
This bacterium was assembled, annotated, and curated using Oatmeal v3.0. See our technical documentation for further details: https://docs.onecodex.com/en/articles/5357065-assembly-qc-and-annotation-pipeline-versions