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  • Acinetobacter calcoaceticus/baumannii complex
  • Acinetobacter baumannii

Acinetobacter baumannii (ATCC® BAA-1798™)

Overview
Genome Browser
Related Genomes
Quality Control
Assembly Summary
Date PublishedJuly 30, 2021
Length4,018,753 nt
Sequencing TechnologyIllumina + Oxford Nanopore Hybrid Assembly
Number of Contigs7 (3 Circularized)
Assembly LevelChromosome
N503,914,019 nt
%GC39.06%
Organism Summary
NameATCC® BAA-1798™
IsolationSputum
Biosafety Level2
Type StrainNo
Annotations Summary
Number of CDS3,788
Number of Hypothetical Proteins1,680
Number of tRNA73
Number of 5s rRNA6
Number of 16s rRNA6
Number of 23s rRNA6
Input Reads Summary
Oxford Nanopore Read Count144,293
Oxford Nanopore Median Q Score26
Illumina Read Count21,931,775
Illumina Mean Coverage Depth723.857×
Illumina Median Q Score34
ContigStartEndNameProtein ProductEC NumberTypeUniprot IDJump

Most similar genomes

No genomes with >95% similarity found.

Other members of this genus

No genomes found sharing the same genus.

Sequencing Quality Control

Quality control statistics on Illumina sequencing data.
4/4
4 out of 4 passed
PassedNumber of trimmed reads21,931,775
PassedMedian Q score, all bases34
PassedPercent of median Q scores per cycle greater than 25100%
PassedAmbiguous content (% N bases)0%

Assembly Quality Control

Metrics assessing the assembly quality (from CheckM).
3/3
3 out of 3 passed
PassedEstimated genome completeness100%
PassedEstimated genome contamination0%
PassedAverage depth of coverage723.857×
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