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  • Acinetobacter calcoaceticus/baumannii complex
  • Acinetobacter baumannii

Acinetobacter baumannii (ATCC® 17961™)

Overview
Genome Browser
Related Genomes
Quality Control
Assembly Summary
Date PublishedNovember 30, 2021
Length3,984,467 nt
Sequencing TechnologyIllumina + Oxford Nanopore Hybrid Assembly
Number of Contigs5 (1 Circularized)
Assembly LevelChromosome
N503,970,965 nt
%GC39.04%
Organism Summary
NameATCC® 17961™
Genotype
IsolationBlood
TagsType Strain
Biosafety Level2
Type StrainNo
Antigenic Properties
Annotations Summary
Number of CDS3,708
Number of Hypothetical Proteins1,627
Number of tRNA73
Number of 5s rRNA6
Number of 16s rRNA6
Number of 23s rRNA6
Input Reads Summary
Oxford Nanopore Read Count99,125
Oxford Nanopore Median Q Score24
Illumina Read Count9,243,019
Illumina Mean Coverage Depth313.89×
Illumina Median Q Score34
ContigStartEndNameProtein ProductEC NumberTypeUniprot IDJump

Most similar genomes

No genomes with >95% similarity found.

Other members of this genus

No genomes found sharing the same genus.

Sequencing Quality Control

Quality control statistics on Illumina sequencing data.
4/4
4 out of 4 passed
PassedNumber of trimmed reads9,243,019
PassedMedian Q score, all bases34
PassedPercent of median Q scores per cycle greater than 25100%
PassedAmbiguous content (% N bases)0%

Assembly Quality Control

Metrics assessing the assembly quality (from CheckM).
3/3
3 out of 3 passed
PassedEstimated genome completeness100%
PassedEstimated genome contamination0%
PassedAverage depth of coverage313.89×
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