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  • Klebsiella
  • Klebsiella aerogenes

Klebsiella aerogenes (ATCC® 15038™)

Overview
Genome Browser
Related Genomes
Quality Control
Assembly Summary
Date PublishedOctober 30, 2019
Length5,230,446 nt
Sequencing TechnologyIllumina + Oxford Nanopore Hybrid Assembly
Number of Contigs2 (All Circularized)
Assembly LevelComplete
N505,083,259 nt
%GC54.91%
Organism Summary
NameATCC® 15038™
IsolationFeces
Biosafety Level1
Type StrainNo
Annotations Summary
Number of CDS4,808
Number of Hypothetical Proteins1,215
Number of tRNA88
Number of 5s rRNA9
Number of 16s rRNA8
Number of 23s rRNA8
Input Reads Summary
Oxford Nanopore Read Count31,346
Oxford Nanopore Median Q Score23
Illumina Read Count4,732,365
Illumina Mean Coverage Depth184.863×
Illumina Median Q Score38
ContigStartEndNameProtein ProductEC NumberTypeUniprot IDJump

Most similar genomes

No genomes with >95% similarity found.

Other members of this genus

No genomes found sharing the same genus.

Sequencing Quality Control

Quality control statistics on Illumina sequencing data.
4/4
4 out of 4 passed
PassedNumber of trimmed reads4,732,365
PassedMedian Q score, all bases38
PassedPercent of median Q scores per cycle greater than 25100%
PassedAmbiguous content (% N bases)-

Assembly Quality Control

Metrics assessing the assembly quality
3/3
3 out of 3 passed
PassedEstimated genome completeness100%
PassedEstimated genome contamination0.11%
PassedAverage depth of coverage184.863×
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