Assembly Summary | |
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Date Published | March 27, 2020 |
Length | 2,946,738 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 2 (All Circularized) |
Assembly Level | Complete |
N50 | 2,891,242 nt |
%GC | 32.73% |
Organism Summary | |
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Name | ATCC® 43300™ |
Genotype | pvl negative |
Isolation | Clinical isolate |
Biosafety Level | 2 |
Type Strain | No |
Annotations Summary | |
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Number of CDS | 2,837 |
Number of Hypothetical Proteins | 339 |
Number of tRNA | 57 |
Number of 5s rRNA | 7 |
Number of 16s rRNA | 6 |
Number of 23s rRNA | 6 |
Input Reads Summary | |
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Oxford Nanopore Read Count | 3,468 |
Oxford Nanopore Median Q Score | 14 |
Illumina Read Count | 4,610,051 |
Illumina Mean Coverage Depth | 365.206× |
Illumina Median Q Score | 38 |
Contig | Start | End | Name | Protein Product | EC Number | Type | RefSeq ID | Jump |
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No genomes with >95% similarity found.
No genomes found sharing the same genus.