Organism Summary | |
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Catalog Number | ATCC® 750™ |
Strain Alias | [1909, ATCC 4563, ATCC 7349, CBS 94, CCRC 20520, IFO 1070, IFO 1400, JCM 1541, NRRL Y-12699, NRRL Y-12968, NRRL Y-607] |
Isolation | Patient with bronchomycosis |
Tags | Type Strain |
Biosafety Level | 1 |
Type Strain | Yes |
Assembly Summary | |
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Date Published | October 30, 2020 |
Length | 14,780,363 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 14 (0 Circularized) |
N50 | 2,484,734 nt |
%GC | 33.27% |
Annotations Summary | |
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Number of BUSCO Annotations | 731 |
Input Reads Summary | |
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Oxford Nanopore Read Count | 331,643 |
Oxford Nanopore Median Q Score | 25 |
Illumina Read Count | 17,750,284 |
Illumina Mean Coverage Depth | 165.373× |
Illumina Median Q Score | 37 |
Contig | Start | End | Protein Product | Type | OrthoDB Group |
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The following genomes have the greatest genomic similarity to this one (≥95% average nucleotide identity):
Taxonomic Name | ATCC Product Page | Strain Alias | Tags | Date Published | Length | Download |
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Sequencing Quality Control | |
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Number of trimmed reads | 17,750,284 |
Median Q score, all bases | 37 |
Percent of median Q scores per cycle greater than 25 | 1% |
Ambiguous content (% N bases) | 0% |
BUSCO Quality Control | |
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Estimated genome completeness | 85.75% |
Average depth of coverage | 165.373× |