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  • Metamycoplasma
  • Metamycoplasma hominis

Metamycoplasma hominis (ATCC® 23114™)

Overview
Genome Browser
Related Genomes
Quality Control
Assembly Summary
Date PublishedJune 14, 2019
Length669,676 nt
Sequencing TechnologyIllumina + Oxford Nanopore Hybrid Assembly
Number of Contigs1 (All Circularized)
Assembly LevelComplete
N50669,676 nt
%GC27.11%
Organism Summary
NameATCC® 23114™
IsolationRectal swab
TagsMSA ComponentType Strain
Biosafety Level2
Type StrainYes
Annotations Summary
Number of CDS1,113
Number of Hypothetical Proteins646
Number of tRNA33
Number of 5s rRNA0
Number of 16s rRNA2
Number of 23s rRNA2
Input Reads Summary
Oxford Nanopore Read Count127,862
Oxford Nanopore Median Q Score17
Illumina Read Count7,496,186
Illumina Mean Coverage Depth2,060×
Illumina Median Q Score38
ContigStartEndNameProtein ProductEC NumberTypeUniprot IDJump

Most similar genomes

No genomes with >95% similarity found.

Other members of this genus

No genomes found sharing the same genus.

Sequencing Quality Control

Quality control statistics on Illumina sequencing data.
4/4
4 out of 4 passed
PassedNumber of trimmed reads7,496,186
PassedMedian Q score, all bases38
PassedPercent of median Q scores per cycle greater than 25100%
PassedAmbiguous content (% N bases)0%

Assembly Quality Control

Metrics assessing the assembly quality
3/3
3 out of 3 passed
PassedEstimated genome completeness100%
PassedEstimated genome contamination0%
PassedAverage depth of coverage2,060×
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