Organism Summary | |
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Catalog Number | ATCC® 2091™ |
Strain Alias | 132 [CBS 2730, CIP 1180.79, IFO 1393, NCYC 854] |
Biosafety Level | 1 |
Type Strain | No |
Assembly Summary | |
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Date Published | April 29, 2024 |
Length | 14,119,171 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 15 (0 Circularized) |
N50 | 1,802,657 nt |
%GC | 33.49% |
Annotations Summary | |
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Number of BUSCO Annotations | 688 |
Input Reads Summary | |
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Oxford Nanopore Read Count | 474,713 |
Oxford Nanopore Median Q Score | 33 |
Illumina Read Count | 72,204,432 |
Illumina Mean Coverage Depth | 716.313× |
Illumina Median Q Score | 34 |
Contig | Start | End | Protein Product | Type | OrthoDB Group |
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The following genomes have the greatest genomic similarity to this one (≥95% average nucleotide identity):
Taxonomic Name | ATCC Product Page | Strain Alias | Tags | Date Published | Length | Download |
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Sequencing Quality Control | |
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Number of trimmed reads | 72,204,432 |
Median Q score, all bases | 34 |
Percent of median Q scores per cycle greater than 25 | 1% |
Ambiguous content (% N bases) | 0% |
BUSCO Quality Control | |
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Estimated genome completeness | 90.8% |
Average depth of coverage | 716.313× |
This fungus was assembled, annotated, and curated using Oatmeal v2.0. See our technical documentation for further details: https://docs.onecodex.com/en/articles/5357065-assembly-qc-and-annotation-pipeline-versions