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  • Staphylococcus aureus

Staphylococcus aureus (ATCC® 10832™)

Overview
Genome Browser
Related Genomes
Quality Control
Assembly Summary
Date PublishedMay 14, 2019
Length2,834,988 nt
Sequencing TechnologyIllumina + Oxford Nanopore Hybrid Assembly
Number of Contigs1 (All Circularized)
Assembly LevelComplete
N502,834,988 nt
%GC32.84%
Organism Summary
NameATCC® 10832™
Biosafety Level2
Type StrainNo
Annotations Summary
Number of CDS2,616
Number of Hypothetical Proteins937
Number of tRNA60
Number of 5s rRNA6
Number of 16s rRNA5
Number of 23s rRNA5
Input Reads Summary
Oxford Nanopore Read Count7,330
Oxford Nanopore Median Q Score16
Illumina Read Count6,136,077
Illumina Mean Coverage Depth459.891×
Illumina Median Q Score38
ContigStartEndNameProtein ProductEC NumberTypeUniprot IDJump

Most similar genomes

No genomes with >95% similarity found.

Other members of this genus

No genomes found sharing the same genus.

Sequencing Quality Control

Quality control statistics on Illumina sequencing data.
4/4
4 out of 4 passed
PassedNumber of trimmed reads6,136,077
PassedMedian Q score, all bases38
PassedPercent of median Q scores per cycle greater than 25100%
PassedAmbiguous content (% N bases)0%

Assembly Quality Control

Metrics assessing the assembly quality (from CheckM).
3/3
3 out of 3 passed
PassedEstimated genome completeness99.67%
PassedEstimated genome contamination0.08%
PassedAverage depth of coverage459.891×
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