- Acinetobacter calcoaceticus/baumannii complex
- Acinetobacter baumannii
Acinetobacter baumannii (ATCC® BAA-3036™)
Overview
Genome Browser
Related Genomes
Quality Control
| Assembly Summary | |
|---|---|
| Date Published | August 3, 2020 |
| Length | 4,083,056 bp |
| Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
| Number of Contigs | 13 (6 Circularized) |
| N50 | 3,286,198 bp |
| %GC | 38.98% |
| Organism Summary | |
|---|---|
| Name | ATCC® BAA-3036™ |
| Biosafety Level | 2 |
| Type Strain | No |
| Annotations Summary | |
|---|---|
| Number of CDS | 3,817 |
| Number of Hypothetical Proteins | 1,676 |
| Number of tRNA | 73 |
| Number of 5s rRNA | 6 |
| Number of 16s rRNA | 6 |
| Number of 23s rRNA | 6 |
| Input Reads Summary | |
|---|---|
| Oxford Nanopore Read Count | 681,795 |
| Oxford Nanopore Median Q Score | 25 |
| Illumina Read Count | 4,497,487 |
| Illumina Mean Coverage Depth | 255.072× |
| Illumina Median Q Score | 38 |
Loading...
Loading data...
Sequencing Quality Control
Quality control statistics on Illumina sequencing data.
4 out of 4 passed
PassedNumber of trimmed reads4,497,487
PassedMedian Q score, all bases38
PassedPercent of median Q scores per cycle greater than 25100%
PassedAmbiguous content (% N bases)0%
Assembly Quality Control
Metrics assessing the assembly quality (from CheckM).
3 out of 3 passed
PassedEstimated genome completeness100%
PassedEstimated genome contamination0.55%
PassedAverage depth of coverage255.072×
This website uses cookies to ensure you get the best experience on our website. Learn moreDecline