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  • Staphylococcus haemolyticus

Staphylococcus haemolyticus (ATCC® 700564™)

Overview
Genome Browser
Related Genomes
Quality Control
Assembly Summary
Date PublishedJuly 1, 2021
Length2,700,597 nt
Sequencing TechnologyIllumina + Oxford Nanopore Hybrid Assembly
Number of Contigs5 (3 Circularized)
Assembly LevelChromosome
N502,657,341 nt
%GC32.69%
Organism Summary
NameATCC® 700564™
Genotype
IsolationBlood of neurology patient with bacteremia
Biosafety Level2
Type StrainNo
Antigenic Properties
Annotations Summary
Number of CDS2,625
Number of Hypothetical Proteins1,016
Number of tRNA63
Number of 5s rRNA6
Number of 16s rRNA5
Number of 23s rRNA5
Input Reads Summary
Oxford Nanopore Read Count161,011
Oxford Nanopore Median Q Score25
Illumina Read Count21,898,854
Illumina Mean Coverage Depth1,108.577×
Illumina Median Q Score34
ContigStartEndNameProtein ProductEC NumberTypeUniprot IDJump

Most similar genomes

No genomes with >95% similarity found.

Other members of this genus

No genomes found sharing the same genus.

Sequencing Quality Control

Quality control statistics on Illumina sequencing data.
4/4
4 out of 4 passed
PassedNumber of trimmed reads21,898,854
PassedMedian Q score, all bases34
PassedPercent of median Q scores per cycle greater than 25100%
PassedAmbiguous content (% N bases)0%

Assembly Quality Control

Metrics assessing the assembly quality (from CheckM).
3/3
3 out of 3 passed
PassedEstimated genome completeness99.62%
PassedEstimated genome contamination0%
PassedAverage depth of coverage1,108.577×
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