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  • Staphylococcus aureus

Staphylococcus aureus (ATCC® 9144™)

Overview
Genome Browser
Related Genomes
Quality Control
Assembly Summary
Date PublishedFebruary 26, 2020
Length2,858,465 nt
Sequencing TechnologyIllumina + Oxford Nanopore Hybrid Assembly
Number of Contigs2 (All Circularized)
Assembly LevelComplete
N502,830,975 nt
%GC32.87%
Organism Summary
NameATCC® 9144™
Biosafety Level2
Type StrainNo
Annotations Summary
Number of CDS2,635
Number of Hypothetical Proteins955
Number of tRNA60
Number of 5s rRNA7
Number of 16s rRNA6
Number of 23s rRNA6
Input Reads Summary
Oxford Nanopore Read Count347,241
Oxford Nanopore Median Q Score26
Illumina Read Count20,317,610
Illumina Mean Coverage Depth976.788×
Illumina Median Q Score34
ContigStartEndNameProtein ProductEC NumberTypeUniprot IDJump

Most similar genomes

No genomes with >95% similarity found.

Other members of this genus

No genomes found sharing the same genus.

Sequencing Quality Control

Quality control statistics on Illumina sequencing data.
4/4
4 out of 4 passed
PassedNumber of trimmed reads20,317,610
PassedMedian Q score, all bases34
PassedPercent of median Q scores per cycle greater than 25100%
PassedAmbiguous content (% N bases)-

Assembly Quality Control

Metrics assessing the assembly quality
3/3
3 out of 3 passed
PassedEstimated genome completeness99.23%
PassedEstimated genome contamination0.22%
PassedAverage depth of coverage976.788×
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