Assembly Summary | |
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Date Published | August 3, 2020 |
Length | 4,172,124 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 6 (4 Circularized) |
Assembly Level | Chromosome |
N50 | 3,984,635 nt |
%GC | 39.2% |
Organism Summary | |
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Name | ATCC® BAA-1799™ |
Isolation | Sputum |
Biosafety Level | 2 |
Type Strain | No |
Annotations Summary | |
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Number of CDS | 3,987 |
Number of Hypothetical Proteins | 662 |
Number of tRNA | 73 |
Number of 5s rRNA | 6 |
Number of 16s rRNA | 6 |
Number of 23s rRNA | 6 |
Input Reads Summary | |
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Oxford Nanopore Read Count | 132,640 |
Oxford Nanopore Median Q Score | 25 |
Illumina Read Count | 4,456,747 |
Illumina Mean Coverage Depth | 232.744× |
Illumina Median Q Score | 38 |
Contig | Start | End | Name | Protein Product | EC Number | Type | RefSeq ID | Jump |
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No genomes with >95% similarity found.
No genomes found sharing the same genus.