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  • Haemophilus
  • Haemophilus influenzae

Haemophilus influenzae (ATCC® 51907™)

Overview
Genome Browser
Related Genomes
Quality Control
Assembly Summary
Date PublishedMay 14, 2019
Length1,830,651 nt
Sequencing TechnologyIllumina + Oxford Nanopore Hybrid Assembly
Number of Contigs1 (All Circularized)
Assembly LevelComplete
N501,830,651 nt
%GC38.14%
Organism Summary
NameATCC® 51907™
Genotype
Isolation
Biosafety Level1
Type StrainNo
Antigenic Properties
Annotations Summary
Number of CDS1,716
Number of Hypothetical Proteins396
Number of tRNA57
Number of 5s rRNA7
Number of 16s rRNA6
Number of 23s rRNA6
Input Reads Summary
Oxford Nanopore Read Count26,953
Oxford Nanopore Median Q Score16
Illumina Read Count1,399,620
Illumina Mean Coverage Depth100.189×
Illumina Median Q Score37
ContigStartEndNameProtein ProductEC NumberTypeUniprot IDJump

Most similar genomes

No genomes with >95% similarity found.

Other members of this genus

No genomes found sharing the same genus.

Sequencing Quality Control

Quality control statistics on Illumina sequencing data.
4/4
4 out of 4 passed
PassedNumber of trimmed reads1,399,620
PassedMedian Q score, all bases37
PassedPercent of median Q scores per cycle greater than 25100%
PassedAmbiguous content (% N bases)0%

Assembly Quality Control

Metrics assessing the assembly quality (from CheckM).
3/3
3 out of 3 passed
PassedEstimated genome completeness99.77%
PassedEstimated genome contamination0.27%
PassedAverage depth of coverage100.189×
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